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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900222.1_cds_XP_016450274.1_44743
CDS Infomation

[gene=LOC107775107] [db_xref=GeneID:107775107] [protein=phospholipase D Z-like] [protein_id=XP_016450274.1] [location=join(8014..8173,9100..9304,9647..9848,10673..10866,11614..11767,12294..12458,13558..14016)] [gbkey=CDS]
Sequence

ATGAGAGCCATTATCGCATTTCTCCTCTTCCTTTTCCTTACAACAACTACTAGTATTACA
GCAACAGCTCATGAGTCTTCCAAATGCAAAGCGTGGCTGGTTCAATCCATTCCCACTGAT
ATGCCCCAACTTCCTCCTGTTCCCGGCCTTCTTTCAACCGCGGATGTCCTTCAATGGCTG
GCTGGAAACTCTTCAAAGAGTTTGGACATAATTGCACAATATTGGCAATTAGTACCAAGT
CTCTCTGATCCTCGTTCAGGGGATTATGGATACTCAGATGAGAAGTTGCAGCAATTTGGG
GCTAACGAAGGATTGAAAGTCTACAAAGCATTAGAAAGTGCTGCAAATCGCAAACTTCCA
ATTAGACTTTTACAGCATTCTGGAGTTTATCCCGATTACACGGAAGAACCATCCAACTTA
GCATCAGGGAGGCCAAATGTGAAGAATGTTACCTTGCTGCTTAGCGACTGGTGGGGATCA
GGTGTAGTTCATGCTAAAGTTTGGATCTCAGACAGTAGAGATGTTTATATTGGATCTGCA
AACAATGACTGGAAATCTCTTACTCAGGTAAAGGAGGTAGGAATATATCTCGCTGGTTGC
TCAGATATAGCAAAAAAGGTTGAAATCTACTATGACAACCTTTGGAAACTTGCCCACCTT
GATGTTTCAGCTTACACAAGATCAGTTTGGGATTCACAGTGGCAGATTAATCGCAAGGTT
CCATGTTGGTCCCATTATGTAAATCCTAAAGACAGGTGCAGATCACCACTTCCCAAATGT
ATGGAGGTTGCTCACATCTCTGGCTACCCTGTATTATCAGACCCTTTTATGTTTCACATT
CCCATAGAGACACCTGGAGTCAATGATTCGTTTTTCCATCCTCAACCAAGCTACCTTTCA
TTTGCTCCTCCAGAGCTCTTGTTTGGTAAGTACTATACAGATGAACAGGCTTGGGTGGAC
ACCATTAAATCAGTAGGAAATGGAGGAACAGTCAGAATCAACACCATGGACTGGCTTGGT
CAGTCAGGATACACAAAAGAAACAGTTTATTGGCCATCACTTTCTTCAGCTATTTCAGAG
GTTGTCTTCTCCAAGAGCGCGAAGATTCAAATACTGGTCGCAAAGTGGGCTCACTTTATA
AACAACACAGATCAGTATCTAAAGTCATTGCTTTACTCCAACACCCTGTGCTCTTCTTCA
AAGTACAATCATTGTTCTGGTAAAGTCGAGATCAAGTATTACATTGTTCCAGGATACAAT
TCAACTGGACCTGCAGCACTTAATGGTACTGCCACCGGGAATATGTATCCTGGCTATACA
CGGGTTAATCATGGTAAATATGCAGTTAGTGATACGCGTGCACACATAAGCACCAGCAAC
CTGGTGTGGGACTACTTTTACACGACAGCAGGCGTTAGCTTTGGGACATATCAACCTGCT
ATTGTTTCGCAACTTCAAGAAATCTTCAATGCTGACTGGAATTCGCCATATGCAGTGCCA
GTTGAACCGATGGAGGAAGGTCATGCATGTTCAAGCTGA

Peptide Sequence

PEP ID

XP_016450274.1
PEP Infomation

PREDICTED: phospholipase D Z-like [Nicotiana tabacum]
Sequence

MRAIIAFLLFLFLTTTTSITATAHESSKCKAWLVQSIPTDMPQLPPVPGLLSTADVLQWL
AGNSSKSLDIIAQYWQLVPSLSDPRSGDYGYSDEKLQQFGANEGLKVYKALESAANRKLP
IRLLQHSGVYPDYTEEPSNLASGRPNVKNVTLLLSDWWGSGVVHAKVWISDSRDVYIGSA
NNDWKSLTQVKEVGIYLAGCSDIAKKVEIYYDNLWKLAHLDVSAYTRSVWDSQWQINRKV
PCWSHYVNPKDRCRSPLPKCMEVAHISGYPVLSDPFMFHIPIETPGVNDSFFHPQPSYLS
FAPPELLFGKYYTDEQAWVDTIKSVGNGGTVRINTMDWLGQSGYTKETVYWPSLSSAISE
VVFSKSAKIQILVAKWAHFINNTDQYLKSLLYSNTLCSSSKYNHCSGKVEIKYYIVPGYN
STGPAALNGTATGNMYPGYTRVNHGKYAVSDTRAHISTSNLVWDYFYTTAGVSFGTYQPA
IVSQLQEIFNADWNSPYAVPVEPMEEGHACSS

Transcript Sequence

Gene sequence data has not been registered.